Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8ZDX

Crystal structure of MjHKU4r-CoV-1 RBD bound to hDPP4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-12
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.979183
Spacegroup nameP 1 21 1
Unit cell lengths74.980, 121.901, 144.664
Unit cell angles90.00, 93.82, 90.00
Refinement procedure
Resolution19.690 - 2.600
R-factor0.2099
Rwork0.208
R-free0.25190
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.485
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.750
High resolution limit [Å]2.6002.600
Number of reflections7944412098
<I/σ(I)>8.85
Completeness [%]99.0
Redundancy6.95
CC(1/2)0.9970.372
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M HEPES (pH 7.0) and 10% (wt/vol) PEG 6000

250059

PDB entries from 2026-03-04

PDB statisticsPDBj update infoContact PDBjnumon