8ZBH
Crystal structure of TEAD3 YAP binding domain with compound 3
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-05-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.170, 101.740, 149.080 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.170 - 2.600 |
R-factor | 0.2148 |
Rwork | 0.212 |
R-free | 0.27020 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.334 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | ELVES |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.170 | 2.693 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.035 | 0.358 |
Number of reflections | 22344 | 2194 |
<I/σ(I)> | 15.12 | 2.07 |
Completeness [%] | 99.8 | |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.806 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 300 | 0.1M HEPES pH 7.5, 0.2M Ammonium acetate, 18% PEG 3350 |