8Z2V
Crystal structure of Sonic hedgehog in complex with antibody 5E1 mutant H-R102A with metals
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-19 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 96.641, 69.752, 119.270 |
Unit cell angles | 90.00, 108.73, 90.00 |
Refinement procedure
Resolution | 56.480 - 1.890 |
R-factor | 0.18747 |
Rwork | 0.186 |
R-free | 0.22514 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.018 |
RMSD bond angle | 2.140 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.480 | 1.990 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.064 | 0.436 |
Rpim | 0.032 | 0.226 |
Number of reflections | 58458 | 8161 |
<I/σ(I)> | 11.8 | 3.2 |
Completeness [%] | 97.3 | 93.1 |
Redundancy | 4.9 | |
CC(1/2) | 0.999 | 0.854 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 200mM MgCl2, 20% PEG 3350 |