8YYZ
Crystal structure of Sonic hedgehog in complex with antibody 5E1 mutant H-R102A in the absence of metals
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-22 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 69.510, 84.080, 126.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.040 - 1.900 |
Rwork | 0.184 |
R-free | 0.22180 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.438 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.040 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.116 | 0.530 |
Rpim | 0.046 | 0.230 |
Number of reflections | 58004 | 7699 |
<I/σ(I)> | 9.4 | 2.7 |
Completeness [%] | 98.4 | 91.1 |
Redundancy | 7.3 | 5.8 |
CC(1/2) | 0.990 | 0.851 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.2M Ammonium iodide, 20% w/v Polyethylene glycol 3350 |