8YQH
Crystal structure of Cry3Aa-PEI at 3.1 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2023-04-26 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 115.846, 133.368, 105.798 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.870 - 3.110 |
R-factor | 0.197 |
Rwork | 0.193 |
R-free | 0.27540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dlc |
RMSD bond length | 0.010 |
RMSD bond angle | 1.274 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.18_3861)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 3.150 |
High resolution limit [Å] | 3.100 | 8.230 | 3.100 |
Rmerge | 0.194 | 0.054 | 0.836 |
Rmeas | 0.202 | 0.057 | 0.869 |
Rpim | 0.056 | 0.016 | 0.236 |
Total number of observations | 194996 | ||
Number of reflections | 15017 | 809 | 752 |
<I/σ(I)> | 3.8 | ||
Completeness [%] | 99.9 | 100 | 100 |
Redundancy | 13 | 13.3 | 13.3 |
CC(1/2) | 0.980 | 0.998 | 0.837 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | Cry3Aa crystals obatined in conditon: 100 mM HEPES/NaOH pH7.5, 20% v/v 1,4-butanediol, 200 mM NaCl. Then the Cry3Aa crystals soaked with 50ug/ml PEI, 5mM EDC and 10 mM NHS at 291K overnight. |