8YP1
Crystal structure of HARS WHEP domain fused with Fc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.943, 112.984, 110.211 |
Unit cell angles | 90.00, 90.37, 90.00 |
Refinement procedure
Resolution | 49.580 - 2.790 |
R-factor | 0.21869 |
Rwork | 0.217 |
R-free | 0.25634 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vh5 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.442 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.850 |
High resolution limit [Å] | 2.790 | 7.590 | 2.800 |
Rmerge | 0.165 | 0.057 | 1.785 |
Rmeas | 0.181 | 0.064 | 1.954 |
Rpim | 0.073 | 0.027 | 0.788 |
Number of reflections | 36360 | 1863 | 1842 |
<I/σ(I)> | 6 | ||
Completeness [%] | 99.9 | 99.4 | 100 |
Redundancy | 6 | 5.2 | 5.8 |
CC(1/2) | 0.990 | 0.996 | 0.639 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.5 | 289 | 100mM BIS-TRIS pH 5.5, 25% PEG 3350 |