8YM4
Structure of Caspase-8/cFLIP death effector domain assembly
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97942 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 82.266, 167.448, 179.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.840 - 2.340 |
R-factor | 0.2079 |
Rwork | 0.206 |
R-free | 0.25250 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.707 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.420 |
High resolution limit [Å] | 2.340 | 5.030 | 2.340 |
Rmerge | 0.094 | 0.061 | 0.358 |
Rmeas | 0.065 | 0.389 | |
Rpim | 0.024 | 0.147 | |
Number of reflections | 102320 | 10860 | 9096 |
<I/σ(I)> | 22.935 | ||
Completeness [%] | 97.9 | 99.4 | 88 |
Redundancy | 7.6 | 7.1 | 6.8 |
CC(1/2) | 0.998 | 0.887 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 0.1 M MES pH 6.5, 0.08 M sodium chloride, 0.2 M Potassium Thiocyanate, 10 % PEG 4000, 0.01 M TCEP |