8XND
Crystal structure of serine hydroxymethyltransferase 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-27 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.18057 |
Spacegroup name | P 32 |
Unit cell lengths | 151.540, 151.540, 234.970 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.530 - 3.450 |
R-factor | 0.15499 |
Rwork | 0.153 |
R-free | 0.19205 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 2.693 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.530 | 3.520 |
High resolution limit [Å] | 3.450 | 3.450 |
Rmerge | 0.161 | |
Number of reflections | 79382 | 4531 |
<I/σ(I)> | 10.4 | |
Completeness [%] | 99.9 | |
Redundancy | 5.3 | |
CC(1/2) | 0.995 | 0.787 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Sodium HEPES pH 7.5,30 %(v/v) PEG 300 |