8X4L
Crystal structure of the N132A mutant of DIMT1 from Pyrococcus horikoshii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2022-09-06 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 116.220, 80.550, 84.380 |
Unit cell angles | 90.00, 114.94, 90.00 |
Refinement procedure
Resolution | 64.080 - 2.600 |
R-factor | 0.19047 |
Rwork | 0.188 |
R-free | 0.23939 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.443 |
Data reduction software | MOSFLM (7.4.0) |
Data scaling software | Aimless (0.7.13) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.510 | 2.720 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.126 | 0.485 |
Rmeas | 0.141 | 0.543 |
Rpim | 0.061 | 0.238 |
Total number of observations | 102825 | 12471 |
Number of reflections | 21707 | 2644 |
<I/σ(I)> | 6.5 | 2.4 |
Completeness [%] | 99.5 | |
Redundancy | 4.7 | 4.7 |
CC(1/2) | 0.992 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 293 | 0.2 M Zinc Acetate Dihydrate, 0.1 M Sodium Cacodylate Trihydrate pH 6.5, 18% (w/v) PEG 8000 |