8WSJ
Crystal structure of SARS-Cov-2 main protease, pH=6.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-10-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.837, 102.727, 102.984 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.490 - 1.740 |
R-factor | 0.210270546386 |
Rwork | 0.209 |
R-free | 0.23312 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.827 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.490 | 1.840 |
High resolution limit [Å] | 1.740 | 1.740 |
Rmerge | 0.078 | 0.933 |
Number of reflections | 72092 | 10681 |
<I/σ(I)> | 17.1 | |
Completeness [%] | 97.4 | |
Redundancy | 13 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2M Ammonium acetate,0.1M BIS-TRIS pH6.5, 25% PEG3350 |