8VP4
Crystal Structure of JF1cpCasp2 with Peptide Inhibitor AcVDVAD-CHO
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X17B1 |
Synchrotron site | NSLS |
Beamline | X17B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-14 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.867, 101.548, 112.555 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.700 - 1.510 |
R-factor | 0.1893 |
Rwork | 0.188 |
R-free | 0.21450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.921 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.19.2_4158) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.700 | 1.630 |
High resolution limit [Å] | 1.510 | 1.510 |
Rmerge | 0.140 | 1.166 |
Rmeas | 0.158 | |
Rpim | 0.056 | 0.455 |
Number of reflections | 69875 | 3494 |
<I/σ(I)> | 8.1 | |
Completeness [%] | 94.3 | |
Redundancy | 7.7 | |
CC(1/2) | 0.994 | 0.697 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 0.1 M Tris, pH 8.0, 0.2 M Sodium chloride, 20% w/v PEG 6000 |