8VHD
Crystal Structure of Human IDH1 R132Q in complex with NADPH and Isocitrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-22 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | .97946 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.408, 103.894, 108.272 |
Unit cell angles | 90.00, 98.54, 90.00 |
Refinement procedure
Resolution | 39.180 - 2.380 |
R-factor | 0.1711 |
Rwork | 0.169 |
R-free | 0.21990 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.454 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.180 | 2.460 |
High resolution limit [Å] | 2.380 | 2.380 |
Number of reflections | 72042 | 6981 |
<I/σ(I)> | 5.28 | |
Completeness [%] | 96.9 | |
Redundancy | 2 | |
CC(1/2) | 0.996 | 0.496 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277.15 | 100mM Bis-tris propane, 200mM Sodium Iodide, 24%(w/v) PEG 3350 |