8V57
Complex of murine cathepsin K with bound cystatin C inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 2 2 21 |
Unit cell lengths | 92.930, 179.610, 73.352 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.350 - 2.750 |
R-factor | 0.23 |
Rwork | 0.229 |
R-free | 0.25790 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.723 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.800 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmeas | 0.064 | 0.830 |
Rpim | 0.024 | 0.305 |
Number of reflections | 30916 | 1413 |
<I/σ(I)> | 7.3 | 1.67 |
Completeness [%] | 92.6 | 86.6 |
Redundancy | 7.3 | 7.1 |
CC(1/2) | 1.000 | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 5mg/ml CtsK+Cystatin C co-purified with 12mer GlcNS6S-GlcA-GlcNS3S6S-Ido2S-GlcNS6S-Ido2S-GlcNS6S-Ido2S-GlcNS6S-Ido2S-GlcNS6S-GlcA-pNP, sodium citrate, barium chloride, ammonium sulfate, PEG-4000 |