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8V57

Complex of murine cathepsin K with bound cystatin C inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-09
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 2 2 21
Unit cell lengths92.930, 179.610, 73.352
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.350 - 2.750
R-factor0.23
Rwork0.229
R-free0.25790
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.723
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.800
High resolution limit [Å]2.7502.750
Rmeas0.0640.830
Rpim0.0240.305
Number of reflections309161413
<I/σ(I)>7.31.67
Completeness [%]92.686.6
Redundancy7.37.1
CC(1/2)1.0000.850
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52935mg/ml CtsK+Cystatin C co-purified with 12mer GlcNS6S-GlcA-GlcNS3S6S-Ido2S-GlcNS6S-Ido2S-GlcNS6S-Ido2S-GlcNS6S-Ido2S-GlcNS6S-GlcA-pNP, sodium citrate, barium chloride, ammonium sulfate, PEG-4000

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PDB entries from 2025-07-09

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