8V1V
Human DNA Ligase I F872L bound to adenylated nicked DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.966, 96.582, 114.767 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.870 - 2.300 |
R-factor | 0.1814 |
Rwork | 0.179 |
R-free | 0.22340 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.649 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmeas | 0.218 | 0.941 |
Number of reflections | 35438 | 1750 |
<I/σ(I)> | 12.75 | |
Completeness [%] | 96.3 | 97.3 |
Redundancy | 5.9 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | MES pH5.5 100mM, Lithium acetate 500mM, PEG 3350 10% |