8V05

Crystal structure of mouse PLD3

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	APS BEAMLINE 23-ID-D
Synchrotron site	APS
Beamline	23-ID-D
Temperature [K]	100
Detector technology	PIXEL
Collection date	2018-10-30
Detector	DECTRIS PILATUS3 6M
Wavelength(s)	1.0332
Spacegroup name	P 32 2 1
Unit cell lengths	94.163, 94.163, 109.369
Unit cell angles	90.00, 90.00, 120.00

Refinement procedure

Resolution	47.080 - 2.080
R-factor	0.2081
Rwork	0.206
R-free	0.24310
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.003
RMSD bond angle	0.564
Data reduction software	HKL-2000
Data scaling software	HKL-2000
Phasing software	PHASER
Refinement software	PHENIX ((1.19.2_4158: ???))

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	50.000	50.000	2.120
High resolution limit [Å]	2.080	5.640	2.080
Rmerge		0.034	0.644
Rmeas		0.035	0.669
Rpim		0.008	0.176
Number of reflections	34162	1854	1674
<I/σ(I)>	5.5
Completeness [%]	100.0	100	99.8
Redundancy	18.7	18.5	13
CC(1/2)	0.990	0.999	0.940

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		277.15	12% PEG3350, 0.5 mM magnesium chloride, 0.133 M di-ammonium tartrate, pH 6.6, 15% w/v ethylene glycol