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8UPC

Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K158M)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 21 21 2
Unit cell lengths72.151, 77.505, 58.054
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.100 - 1.200
R-factor0.13988
Rwork0.139
R-free0.16396
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.802
Data reduction softwareHKL-2000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.220
High resolution limit [Å]1.2001.200
Number of reflections999883707
<I/σ(I)>27.5
Completeness [%]97.0
Redundancy11
CC(1/2)0.9980.762
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 uL 18 mg/mL protein in 50 mM HEPES, pH 7.0, 150 mM sodium chloride + 0.2 uL reservoir Molecular Dimensions Morpheus B12, pH 8.5)

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PDB entries from 2024-07-17

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