8UKW
Crystal structure the extracellular region of the epidermal growth factor receptor variant III (EGFRvIII) at pH 5.0
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-B |
| Synchrotron site | APS |
| Beamline | 23-ID-B |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2010-04-10 |
| Detector | MAR CCD 300 mm |
| Wavelength(s) | 1.0332 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 48.818, 88.294, 99.751 |
| Unit cell angles | 90.00, 95.25, 90.00 |
Refinement procedure
| Resolution | 45.330 - 2.390 |
| R-factor | 0.2163 |
| Rwork | 0.215 |
| R-free | 0.24360 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.812 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.610 | 2.480 |
| High resolution limit [Å] | 2.390 | 2.390 |
| Rmerge | 0.066 | 0.705 |
| Rmeas | 0.079 | 0.835 |
| Rpim | 0.042 | 0.443 |
| Total number of observations | 115842 | 12278 |
| Number of reflections | 33254 | 3486 |
| <I/σ(I)> | 11.7 | 1.8 |
| Completeness [%] | 99.3 | |
| Redundancy | 3.5 | 3.5 |
| CC(1/2) | 0.998 | 0.796 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 7 mg/ml protein, 27.5% PEG 3350, 50 mM Na Citrate pH 5.0 |






