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8U6G

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 3-(2-(2-(3-acryloyl-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-1-yl)ethoxy)-4-chlorophenoxy)-5-chlorobenzonitrile (JLJ744), a non-nucleoside inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-11-09
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9201
Spacegroup nameC 1 2 1
Unit cell lengths224.206, 68.746, 104.123
Unit cell angles90.00, 107.42, 90.00
Refinement procedure
Resolution99.300 - 2.770
R-factor0.21542
Rwork0.213
R-free0.26998
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle1.429
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0405)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]99.3002.823
High resolution limit [Å]2.7702.770
Rmerge0.0942.497
Rmeas0.1112.923
Rpim0.0591.513
Number of reflections384191901
<I/σ(I)>9.8
Completeness [%]99.499.4
Redundancy6.8
CC(1/2)0.9960.332
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.827750 mM Imidazole pH 6.8, 14% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

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PDB entries from 2024-10-09

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