Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8U4U

Crystal structure of 53BP1 tandem Tudor domain homodimer engineered with two disulfide bridges

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2019-02-15
DetectorADSC QUANTUM 315r
Wavelength(s)0.9794
Spacegroup nameP 21 21 21
Unit cell lengths72.500, 161.825, 179.947
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.190 - 3.790
R-factor0.2513
Rwork0.246
R-free0.29970
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.404
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.926
High resolution limit [Å]3.7903.790
Rmerge0.1200.614
Rmeas0.1310.680
Rpim0.0520.284
Number of reflections195411631
<I/σ(I)>15.73.23
Completeness [%]89.4
Redundancy5.7
CC(1/2)0.9960.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293Crystals of the protein (15 mg/mL) were obtained by the hanging drop vapor diffusion method, mixing 1 microliter of the sample in 50 mM Tris-HCl, pH 7.0, 100 mM NaCl and 1 microliter of the reservoir solution (0.1 M Bis-Tris, pH 6.5) at 293 K. The crystals were cryoprotected with 25% (w/v) xylitol

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon