8U1G
Prefusion-stabilized SARS-CoV-2 S2 subunit
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | H 3 |
Unit cell lengths | 78.990, 78.990, 479.530 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 67.720 - 3.200 |
R-factor | 0.2357 |
Rwork | 0.226 |
R-free | 0.26190 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.561 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.920 | 3.420 |
High resolution limit [Å] | 3.200 | 3.200 |
Number of reflections | 18384 | 3362 |
<I/σ(I)> | 3.2 | 1.8 |
Completeness [%] | 99.7 | |
Redundancy | 4.4 | |
CC(1/2) | 0.850 | 0.520 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1 M HEPES pH 7.5, 8% (v/v) ethylene glycol and 10% (v/v) PEG 8000 |