8TQ8
Crystal structure of Fab.34.5.8 in complex with MHC-I (H2-Dd)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 273 |
| Detector technology | PIXEL |
| Collection date | 2022-09-23 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 1 2 1 |
| Unit cell lengths | 87.087, 50.892, 224.825 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 87.090 - 2.690 |
| R-factor | 0.2085 |
| Rwork | 0.201 |
| R-free | 0.24250 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5weu |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.756 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 87.090 | 2.800 |
| High resolution limit [Å] | 2.690 | 2.690 |
| Rmerge | 0.145 | 0.927 |
| Rpim | 0.085 | 0.455 |
| Number of reflections | 54120 | 5458 |
| <I/σ(I)> | 7.6 | 1.3 |
| Completeness [%] | 97.9 | 99.3 |
| Redundancy | 3.8 | |
| CC(1/2) | 0.990 | 0.565 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 18% PEG4000, 0.1 M MES, pH 6.0, 0.12 M calcium acetate |






