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8TM7

Human NAMPT in complex with substrate NAM and small molecule activator NP-A3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2019-11-02
DetectorRAYONIX MX-300
Wavelength(s)0.9786
Spacegroup nameP 1 21 1
Unit cell lengths60.560, 106.864, 83.222
Unit cell angles90.00, 96.71, 90.00
Refinement procedure
Resolution52.470 - 1.790
R-factor0.17887
Rwork0.178
R-free0.19753
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2e5d
RMSD bond length0.007
RMSD bond angle1.365
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.4701.820
High resolution limit [Å]1.7901.790
Rmerge0.0870.755
Rmeas0.1020.991
Rpim0.0530.636
Total number of observations10064
Number of reflections987744745
<I/σ(I)>8.71.2
Completeness [%]99.8
Redundancy3.62.1
CC(1/2)0.9960.594
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52900.1 M Tris-HCl, pH 8.5, 0.2 M NaCl, 20% glycerol and 13-18% PEG 3350

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