8T9B
Structure of the CK variant of Fab F1 (FabC-F1) in complex with the C-terminal FN3 domain of EphA2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.661, 130.650, 222.996 |
Unit cell angles | 90.00, 89.76, 90.00 |
Refinement procedure
Resolution | 66.120 - 4.200 |
R-factor | 0.2968 |
Rwork | 0.296 |
R-free | 0.31500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8t7f |
RMSD bond length | 0.005 |
RMSD bond angle | 1.006 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 131.330 | 4.430 |
High resolution limit [Å] | 4.200 | 4.200 |
Rmerge | 0.173 | 1.185 |
Rmeas | 0.211 | |
Rpim | 0.119 | 0.813 |
Number of reflections | 31847 | 4648 |
<I/σ(I)> | 4.2 | 1.2 |
Completeness [%] | 97.3 | 97.8 |
Redundancy | 3 | 3 |
CC(1/2) | 0.997 | 0.602 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 1.5 M sodium formate, 100 mM Tris-HCl, pH 8.0 |