8T5F
De novo design of high-affinity protein binders to bioactive helical peptides
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-05 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97911 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 91.324, 91.324, 37.732 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.840 - 1.990 |
R-factor | 0.2206 |
Rwork | 0.219 |
R-free | 0.25080 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.043 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_4761) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.840 | 2.040 |
High resolution limit [Å] | 1.990 | 1.990 |
Rmerge | 0.120 | |
Number of reflections | 11302 | 738 |
<I/σ(I)> | 21.8 | 1.3 |
Completeness [%] | 98.6 | 94.6 |
Redundancy | 15.1 | 15.2 |
CC(1/2) | 0.999 | 0.545 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 0.2 M Sodium chloride, 0.1 M Sodium acetate pH 4.5, and 1.26 M Ammonium sulfate |