8SZM
Crystal structure of E. coli ClpP protease in complex with phosphine oxide compound ACP6-12
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-08-30 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 93.968, 187.589, 169.408 |
Unit cell angles | 90.00, 93.72, 90.00 |
Refinement procedure
Resolution | 79.830 - 2.350 |
R-factor | 0.2063 |
Rwork | 0.203 |
R-free | 0.26030 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.000 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.830 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.069 | 0.619 |
Rmeas | 0.097 | 0.875 |
Rpim | 0.069 | 0.619 |
Number of reflections | 236844 | 23019 |
<I/σ(I)> | 8.78 | 1.26 |
Completeness [%] | 97.2 | |
Redundancy | 2 | |
CC(1/2) | 0.994 | 0.220 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 296.15 | 0.2 M ammonium acetate; 40% 2-methyl-2,4-pentanediol |