8SZE
Crystal structure of Yersinia pestis dihydrofolate reductase in complex with Trimethoprim
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-11-02 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 115.421, 115.421, 146.325 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.870 - 2.500 |
R-factor | 0.2175 |
Rwork | 0.215 |
R-free | 0.23840 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.602 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.570 |
High resolution limit [Å] | 2.480 | 5.330 | 2.480 |
Rmerge | 0.116 | 0.041 | 0.825 |
Rmeas | 0.120 | 0.042 | 0.931 |
Rpim | 0.030 | 0.010 | 0.412 |
Total number of observations | 270357 | ||
Number of reflections | 20235 | 2300 | 1450 |
<I/σ(I)> | 9.8 | ||
Completeness [%] | 96.5 | 100 | 71 |
Redundancy | 13.4 | 16.5 | 4.2 |
CC(1/2) | 0.995 | 0.999 | 0.574 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | Ammonium sulfate, isoproponal |