8SUF
The complex of TOL-1 ectodomain bound to LAT-1 Lectin domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 74.152, 316.755, 172.441 |
Unit cell angles | 90.00, 90.16, 90.00 |
Refinement procedure
Resolution | 74.150 - 4.000 |
R-factor | 0.2908 |
Rwork | 0.288 |
R-free | 0.33770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.081 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 200.000 | 4.420 |
High resolution limit [Å] | 4.000 | 4.000 |
Rmerge | 0.112 | 0.727 |
Number of reflections | 37159 | 2858 |
<I/σ(I)> | 6.2 | 2.1 |
Completeness [%] | 55.6 | 16.7 |
Redundancy | 3.4 | |
CC(1/2) | 0.996 | 0.603 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 297 | 0.2 M Sodium Malonate, 0.1 M Bis-Tris Propane pH 7.5, 26% PEG 3350, 1.2% Myo-Inositol |