8SNK
Crystal structure of metformin hydrolase (MfmAB) from Pseudomonas mendocina sp. MET-2 mutant (MfmA/D188N)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 102.700, 162.300, 152.700 |
Unit cell angles | 90.00, 101.10, 90.00 |
Refinement procedure
Resolution | 19.753 - 1.850 |
Rwork | 0.188 |
R-free | 0.22270 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.646 |
Data reduction software | XDS (VERSION Jan 10, 2022 BUILT=20220820) |
Data scaling software | XSCALE (VERSION Jan 10, 2022 BUILT=20220820) |
Phasing software | MOLREP (Version 11.0) |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 80.000 | 2.050 | 1.950 |
High resolution limit [Å] | 1.850 | 1.950 | 1.850 |
Number of reflections | 207175 | 24782 | 30277 |
<I/σ(I)> | 10.48 | 4.3 | 2.81 |
Completeness [%] | 99.2 | 99.7 | 99.8 |
Redundancy | 4.5067 | ||
CC(1/2) | 0.998 | 0.969 | 0.936 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 1 uL 10 mg/mL protein + 1 uL 20% w/v PEG3350, 0.1 M Bis-Tris propane, 0.2 M NaNO3, pH 7.5 |