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8S84

KOD-H4 DNA polymerase mutant in a ternary complex with DNA/DNA and non-hydrolyzable triphosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976
Spacegroup nameP 21 21 2
Unit cell lengths110.970, 152.462, 70.125
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.580 - 2.350
R-factor0.2383
Rwork0.237
R-free0.27550
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.628
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((dev_4788: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7962.490
High resolution limit [Å]2.3502.350
Number of reflections9558815411
<I/σ(I)>3.75
Completeness [%]99.4
Redundancy3
CC(1/2)0.9850.100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291Morpheus II condition A1: 36 % v/v of a 72% mix: 30% w/v PEG 3000, 40% v/v 1, 2, 4-Butanetriol, 2% w/v NDSB 256; 0.03 M Lithium sulfate, 0.03 M Sodium sulfate, 0.03 Potassium sulfate, 0.1 M MOPSO/Bis-Tris pH 6.5

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