Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8RZK

The Michaelis complex of ZgGH129 D486N from Zobellia galactanivorans with neo-b/k-oligo-carrageenan tetrasaccharide (beta-kappa neo-oligo-carrageenan DP4).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9801
Spacegroup nameI 1 2 1
Unit cell lengths162.734, 105.943, 213.664
Unit cell angles90.00, 111.23, 90.00
Refinement procedure
Resolution47.820 - 2.290
R-factor0.1705
Rwork0.169
R-free0.20160
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.810
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.8902.330
High resolution limit [Å]2.2902.290
Rmeas0.1611.500
Number of reflections1520747468
<I/σ(I)>9.21.5
Completeness [%]100.0100
Redundancy6.97.1
CC(1/2)0.9960.551
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2931.63 mg/ml 2:1 ratio 0.14M Na/K-tartrate, 14% PEG 3350

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon