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8RV1

HIF prolyl hydroxylase 2 (PHD2) T387S variant bound to acetate (ACT) and hydroxylated Hypoxia-inducible Factor 2alpha (HIF2alpha)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-12
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameP 21 21 2
Unit cell lengths130.760, 38.120, 42.400
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.400 - 1.390
R-factor0.1737
Rwork0.173
R-free0.19140
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.306
Data reduction softwarexia2
Data scaling softwared*TREK
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.5901.410
High resolution limit [Å]1.3901.390
Number of reflections436322103
<I/σ(I)>14.5
Completeness [%]100.0
Redundancy12.4
CC(1/2)1.0000.300
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP297(10-35%) PEG 4K, 0.2 M ammonium acetate and 0.1 M sodium ammonium acetate trihydrate pH (4.1-5.6).

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