8RS5
Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-11 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.8856 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 74.360, 74.360, 267.670 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.920 - 1.950 |
R-factor | 0.2593 |
Rwork | 0.258 |
R-free | 0.28300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 0.893 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.000 |
High resolution limit [Å] | 1.950 | 1.950 |
Number of reflections | 55448 | 4057 |
<I/σ(I)> | 8.16 | |
Completeness [%] | 99.0 | 99.9 |
Redundancy | 7.39 | 7.68 |
CC(1/2) | 0.997 | 0.401 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M potassium citrate tribasic monohydrate, 13-16% PEG 3350 |