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8QT4

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6 and NAD+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-06
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9677
Spacegroup nameP 1 21 1
Unit cell lengths38.056, 74.847, 55.981
Unit cell angles90.00, 96.37, 90.00
Refinement procedure
Resolution55.640 - 1.550
R-factor0.1605
Rwork0.159
R-free0.18770
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.871
Data reduction softwareautoPROC
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.6401.580
High resolution limit [Å]1.5501.550
Rmerge0.0780.795
Rmeas0.0850.863
Rpim0.0330.333
Total number of observations287234
Number of reflections448292227
<I/σ(I)>14.22.8
Completeness [%]99.1
Redundancy6.46.5
CC(1/2)0.9980.794
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29325 % (w/v) PEG 3,350 in 0.1 M Bis-Tris pH 6.5

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