8QQ3
Streptavidin with a Ni-cofactor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 115.028, 88.712, 57.790 |
Unit cell angles | 90.00, 97.13, 90.00 |
Refinement procedure
Resolution | 46.130 - 1.600 |
R-factor | 0.163 |
Rwork | 0.162 |
R-free | 0.19060 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.215 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.130 | 1.657 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.067 | 1.236 |
Rmeas | 0.072 | 1.335 |
Rpim | 0.027 | 0.499 |
Number of reflections | 75827 | 7553 |
<I/σ(I)> | 14.5 | 1.1 |
Completeness [%] | 99.8 | |
Redundancy | 6.9 | |
CC(1/2) | 0.999 | 0.735 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M sodium acetate, 0.1 M Tris, pH 8.5, 30% w/v PEG 4K |