8QFB
Crystal structure of human MPP8 C-terminal region (residues 565-860)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-19 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.9282 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 102.556, 179.531, 228.076 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 93.540 - 3.040 |
R-factor | 0.2575 |
Rwork | 0.256 |
R-free | 0.29470 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.846 |
Data reduction software | xia2 |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER (1.20) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 141.030 | 3.080 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.081 | 2.360 |
Rmeas | 0.085 | 2.470 |
Rpim | 0.023 | 0.725 |
Number of reflections | 85128 | 6191 |
<I/σ(I)> | 14.8 | 1.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.2 | 11.2 |
CC(1/2) | 0.999 | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 12.5% (w/v) PEG 4000, 20% (v/v) 1,2,6-hexanetriol, 0.5 mM Morpheus II Oxometalate Mix, 0.1 M Morpheus II GlyGly/AMPD buffer mix pH 8. |