Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8Q9Q

Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC7 deacetylase binding motif

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-11
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)0.976
Spacegroup nameP 21 21 21
Unit cell lengths56.883, 59.361, 76.502
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.940 - 2.110
R-factor0.26635
Rwork0.265
R-free0.28489
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle1.705
Data reduction softwareautoPROC
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]76.5002.170
High resolution limit [Å]2.1102.110
Rmerge0.0890.732
Number of reflections149101222
<I/σ(I)>11
Completeness [%]96.098.9
Redundancy8.82.5
CC(1/2)0.9990.882
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293200 mM sodium acetate trihydrate, 100 mM Bis-Tris propane pH 6.5 and 20% w/v polyethylene glycol 3350 (PEG 3350)

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon