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8Q6K

Human IgD Fab in complex with an orthosteric inhibitor of Phl p 7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2023-03-17
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)0.6199
Spacegroup nameP 21 21 21
Unit cell lengths65.740, 71.041, 122.173
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.750 - 2.100
R-factor0.2165
Rwork0.214
R-free0.25920
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.555
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.19.2_4158: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]61.0902.160
High resolution limit [Å]2.1002.100
Rmerge3.335
Rmeas0.320
Rpim0.0620.655
Number of reflections341982767
<I/σ(I)>9.51.2
Completeness [%]100.0100
Redundancy26.426.7
CC(1/2)0.9980.611
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29115% PEG 8000, 0.1M sodium citrate and 0.05M ammonium sulfate

219869

PDB entries from 2024-05-15

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