8Q1N
Cyclic peptide binder of the WBM-site of WDR5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-18 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 82.174, 82.174, 201.707 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.980 - 1.843 |
R-factor | 0.2002 |
Rwork | 0.198 |
R-free | 0.24320 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.243 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1-4487_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.980 | 1.909 |
High resolution limit [Å] | 1.843 | 1.843 |
Number of reflections | 58518 | 3960 |
<I/σ(I)> | 8.05 | 0.26 |
Completeness [%] | 96.6 | 66.37 |
Redundancy | 26.7 | |
CC(1/2) | 0.995 | 0.361 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2M Li3-Citrate, 20 w/v% PEG3350 |