8PZY
Intracellular leucine aminopeptidase of Pseudomonas aeruginosa PA14 - hexameric assembly with manganese bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-10 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.530, 183.030, 316.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.750 - 1.970 |
R-factor | 0.1778 |
Rwork | 0.176 |
R-free | 0.20400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.965 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.250 | 2.000 |
High resolution limit [Å] | 1.970 | 1.970 |
Rmeas | 0.153 | 3.792 |
Number of reflections | 357632 | 17692 |
<I/σ(I)> | 10.4 | 0.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.7 | |
CC(1/2) | 1.000 | 0.300 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | 5 mM MnCl2 in 20 % PEG 3350, and 172 mM ammonium nitrate |