8PWZ
Crystal Structure of (3R)-hydroxyacyl-ACP dehydratase HadBD from Mycobacterium tuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 96.646, 96.646, 143.921 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 54.566 - 2.002 |
R-factor | 0.250484525568 |
Rwork | 0.246 |
R-free | 0.29046 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.762 |
Data reduction software | XDS |
Data scaling software | STARANISO (2.3.24) |
Phasing software | PHASER (version 2.5.6) |
Refinement software | PHENIX (1.9_1692+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 83.698 | 2.216 |
High resolution limit [Å] | 1.892 | 1.892 |
Rmerge | 0.056 | 1.247 |
Rmeas | 0.057 | 1.112 |
Rpim | 0.014 | 0.287 |
Number of reflections | 14207 | 711 |
<I/σ(I)> | 27.3 | 2.4 |
Completeness [%] | 94.7 | 75.6 |
Redundancy | 18.6 | 14.8 |
CC(1/2) | 0.999 | 0.942 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 285 | 0,1 M NaCacodylate pH 6,5, 40% MPD and 5% PEG 8k |