8OTR
SARS-CoV-2 nsp10-16 methyltransferase in complex with SAM analog BDH 33959089
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-10 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 1.033150 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 167.600, 167.600, 51.480 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.990 - 1.770 |
R-factor | 0.1882 |
Rwork | 0.188 |
R-free | 0.20950 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.961 |
Data reduction software | XDS (1.20.1_4487) |
Data scaling software | XDS (1.20.1_4487) |
Phasing software | PHENIX (1.07) |
Refinement software | PHENIX (1.07) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.990 | 1.833 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.056 | 2.541 |
Rmeas | 0.079 | 3.594 |
Rpim | 0.056 | 2.541 |
Number of reflections | 80684 | 7847 |
<I/σ(I)> | 8.41 | 0.27 |
Completeness [%] | 99.8 | 98.26 |
Redundancy | 2 | 2 |
CC(1/2) | 0.998 | 0.158 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293.15 | 900 mM sodium fluoride, 100 mM 2-(N-morpholino)ethanesulfonic acid |