8K50
Crystal structure of HLA-A*11:01 in complex with KRAS G12V peptide (VVVGARGVGK)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2022-11-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978520 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 116.289, 121.845, 133.376 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.980 - 2.800 |
R-factor | 0.225 |
Rwork | 0.223 |
R-free | 0.28090 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.511 |
Data reduction software | XDS |
Phasing software | PHENIX (1.17.1_3660) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 47325 | 4698 |
<I/σ(I)> | 16.98 | |
Completeness [%] | 99.8 | |
Redundancy | 13.2 | |
CC(1/2) | 0.998 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293.15 | Ammonium sulfate, Sodium cacodylate, PEG 4000 |