8JVL
Identification and characterization of inhibitors covalently modifying catalytic cysteine of UBE2T and blocking ubiquitin transfer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-07-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.95365 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 54.890, 54.890, 184.074 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.140 - 2.060 |
R-factor | 0.2061 |
Rwork | 0.204 |
R-free | 0.22650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.855 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.140 | 2.120 |
High resolution limit [Å] | 2.060 | 2.060 |
Rmerge | 0.017 | 2.050 |
Rmeas | 0.144 | 0.021 |
Rpim | 0.028 | 0.409 |
Total number of observations | 467470 | 32302 |
Number of reflections | 18267 | 1322 |
<I/σ(I)> | 15.6 | 1.7 |
Completeness [%] | 99.6 | |
Redundancy | 25.6 | 24.4 |
CC(1/2) | 0.999 | 0.871 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.8 M Sodium formate pH 7.0 |