Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8JKQ

T95R mutant IRF4 DNA-binding domain bound to an DNA containing GACA motif

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-05-13
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.9752
Spacegroup nameP 21 21 21
Unit cell lengths53.630, 68.890, 247.100
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.080 - 3.090
R-factor0.2458
Rwork0.244
R-free0.27080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8jkl
RMSD bond length0.003
RMSD bond angle0.963
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.7103.170
High resolution limit [Å]3.0903.090
Rmerge0.1821.270
Rmeas0.1901.321
Rpim0.0530.360
Total number of observations22308317005
Number of reflections174071281
<I/σ(I)>10.82.6
Completeness [%]99.2
Redundancy12.813.3
CC(1/2)0.9970.984
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M sodium citrate (pH 5.0) and 10% (w/v) PEG 6000

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon