8IJ9
Crystal structure of the ELKS1/Rab6B complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.193, 93.227, 53.077 |
Unit cell angles | 90.00, 103.74, 90.00 |
Refinement procedure
Resolution | 51.560 - 2.040 |
R-factor | 0.1745 |
Rwork | 0.172 |
R-free | 0.22510 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.129 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.560 | 2.150 |
High resolution limit [Å] | 2.040 | 2.040 |
Rmerge | 0.076 | 0.294 |
Rmeas | 0.098 | 0.390 |
Rpim | 0.060 | 0.254 |
Total number of observations | 59879 | 4710 |
Number of reflections | 26796 | 2644 |
<I/σ(I)> | 7.2 | 2.4 |
Completeness [%] | 90.2 | |
Redundancy | 2.2 | 1.8 |
CC(1/2) | 0.989 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.1 M HEPES pH 7.5 and 42 % v/v Polyethylene glycol 200 |