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8I6D

Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 5-Hydroxy-2,4(1H,3H)-pyrimidinedione, Form VI

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2020-08-20
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths45.980, 77.990, 59.370
Unit cell angles90.00, 102.02, 90.00
Refinement procedure
Resolution25.610 - 2.400
R-factor0.2032
Rwork0.200
R-free0.26973
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ws4
RMSD bond length0.006
RMSD bond angle1.476
Data reduction softwareiMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.6102.486
High resolution limit [Å]2.4002.400
Rmerge0.1250.391
Number of reflections155391513
<I/σ(I)>5.55
Completeness [%]96.3
Redundancy2
CC(1/2)0.9730.667
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH2930.1 M Tris pH 6.5, 1.4 M Sodium citrate, 15% PEG (w/v) 3350, 2% Benzamidine hydrochloride

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