8HUF
B28 in complex with CRM1-Ran-RanBP1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 106.361, 106.361, 304.641 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 100.620 - 2.290 |
R-factor | 0.19269 |
Rwork | 0.191 |
R-free | 0.22180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7cnd |
RMSD bond length | 0.008 |
RMSD bond angle | 1.481 |
Data reduction software | HKL-3000 |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 152.350 | 152.350 | 2.350 |
High resolution limit [Å] | 2.290 | 10.240 | 2.290 |
Rmerge | 0.186 | 0.062 | 2.518 |
Rmeas | 0.190 | 0.064 | 2.576 |
Rpim | 0.037 | 0.014 | 0.532 |
Total number of observations | 2097123 | 21405 | 136230 |
Number of reflections | 79793 | 1085 | 5792 |
<I/σ(I)> | 13.1 | 23.4 | 2.7 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 26.3 | 19.7 | 23.5 |
CC(1/2) | 0.995 | 0.997 | 0.957 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.12 M Monosaccharides (20 mM D-Glucose; 20 mM D-Mannose; 20 mM D-Galactose; 20 mM L-Fucose; 20 mM D-Xylose; 20 mM N-Acetyl-D-Glucosamine), 0.1 M buffer system 1 pH 6.5 (sodium HEPES and MOPS), and 50 % Precipitant Mix 2 (40% v/v Ethylene glycol; 20 % w/v PEG 8000) |