8HRP
Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 in complex with NAD and G3P
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-10-31 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.946, 119.849, 140.632 |
Unit cell angles | 90.00, 91.27, 90.00 |
Refinement procedure
Resolution | 32.860 - 1.990 |
R-factor | 0.16567 |
Rwork | 0.164 |
R-free | 0.20065 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.519 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0403) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 1.990 | 5.430 | 2.000 |
Rmerge | 0.994 | 0.036 | 0.275 |
Number of reflections | 176119 | 18825 | 17428 |
<I/σ(I)> | 10.1 | ||
Completeness [%] | 90.7 | 97.9 | 90.1 |
Redundancy | 1.8 | 1.8 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 3350, Ammonium citrate dibasic |