8HL6
Crystal structure of human valosin-containing protein methyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-01-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 58.170, 58.170, 129.291 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.748 - 1.800 |
R-factor | 0.1935 |
Rwork | 0.192 |
R-free | 0.22620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.923 |
Data reduction software | MOSFLM |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.600 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rpim | 0.023 | 0.683 |
Number of reflections | 23428 | 2011 |
<I/σ(I)> | 17.2 | |
Completeness [%] | 93.2 | |
Redundancy | 9.4 | |
CC(1/2) | 0.999 | 0.405 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 20 % PEG 1000, 0.1 M Na/K phosphate (pH 6.2), and 0.2M sodium chloride |