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8HFM

Crystal Structure of Mycobacterium smegmatis MshC

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-16
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.911648
Spacegroup nameP 41 2 2
Unit cell lengths69.810, 69.810, 236.011
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.320 - 2.410
R-factor0.2077
Rwork0.206
R-free0.23780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3c8z
RMSD bond length0.004
RMSD bond angle0.642
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]69.8102.540
High resolution limit [Å]2.4102.410
Rmerge0.1722.385
Rmeas0.1752.431
Rpim0.0340.468
Total number of observations61700989091
Number of reflections236003341
<I/σ(I)>15.31.7
Completeness [%]100.0
Redundancy26.126.7
CC(1/2)0.9990.778
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.1293Holo protein at 10 mg/mL in 10 mM Tris pH 7, 100 mM NaCl, 2.5 mM 2-mercaptoethanol was mixed with 25 mM CaCl2, 25 mM MgCl2, PEG8000 5-8% (w/v), Morpheus buffer system 2 pH 7.1, ethylene glycol 20% (v/v) in a 1:1 ratio. Suitable crystals were immersed in mother liquor supplemented with 22% (v/v) ethylene glycol as a cryoprotectant and flash frozen in liquid nitrogen for subsequent data collection.

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PDB entries from 2024-10-30

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